Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831523.1_cds_XP_016504558.1_17989
CDS Infomation

[gene=LOC107822517] [db_xref=GeneID:107822517] [protein=uncharacterized protein LOC107822517] [protein_id=XP_016504558.1] [location=complement(join(8206..8997,9431..9607,10491..10609,10861..10963,11384..11656,11737..11934,12691..12993))] [gbkey=CDS]
Sequence

ATGGCAACGGCGACTATCGCCACTGCAGCAGGTGCTGCTGCTCTATTATACTATACGTTA
AATAAGAAATTGCAATCTGCTCCAACAACTGATGATGATGACGAAGAATGTGGCAGCAGC
GGCCAAGATCATGCTCAACTAGGGACTAATAGGGTTTCCAATAGACTTATACAGGCCCCT
GCTACGTGGTTAGAGACAATCGCGACATTATCTGAGACTCTTAGGTTTACTTACTCGGAG
ACCCTGGGCAAGTGGCCTATTGGTGACTTGGCTTTTGGCATCAGTTTTCTTTTGAAGCAA
CAGGGAAACATACATATTAGTAGCATATTCTGTGGCGAAGACAGTACCCAGTTAAAAGGT
TCTGATATTGCTGCAGAGCTTAAATTCCTCTTACACTTGTTGACAGTTTGTTGGCATTTC
TCCAAAAAGCCTTTCCCATTATTCTTGGAGGAGACAGGCTATTCTCAAGAAAGTGTACTA
CTTCAAGAACCCAAAGCTGGAATTCTGAAGCCAGCTTTTACAATACTTGCTGGCCATCGA
TCAAAATCTTTCTTCCTTGTAATCCGTGGAACTCATAGTATTAAAGATACTTTGACAGCT
GTTACCGGTGCAGTTGTGCCTTTCCATCACACTATGGTACACGAGGGAGGAGTTAGCAAT
TTGGTGTTAGGCTATGCGCATTGTGGAATGGTTGCAGCTGCTCGATGGATTGCAAAACTT
GCAACGCCTTGTCTTCTTAAAGCGCTTAGTATTTATCCCGAATACAAACTTAAGATCGTG
GGACATTCCTTGGGTGGAGGAACTGCAGCTCTTTTAACTTATATACTTCGTGAGCAGAAG
GAACTGTCAGCAGCTACCTGTGTAGCATTTGCACCAGCTGCCTGTATGACATGGGAATTA
GCTGAATCAGGGTGTGAATTTATTACCTCAGTAATAAATGGAGCGGATTTGGTGCCTACA
TTTTCAGCTGCTTCAGTGGACGACTTGCGTACTGAGGTGACAGCATCTGCTTGGTTGAAC
GATCTAAGAAATCAGATTGAGCACACTAGGATTCTTAGTACTGTTTATCGTTCTGCATCA
GCCCTGGGATCTCGTCTTCCATCAATTGCCACCGCGAGAGCTAAGGTTGCTGGTGCTGGT
GCAATACTACGGCCTGTTTCCAGTGGAACGCAGGTTGTCATGAAGAGAGCGCAAAGTATG
GCCCAGGCAGCATTGTCGCGGCCTGCCATGCAGTTGTCGTCATGGTCGTGCATTGGTCCC
AGACGTCGACCTACGAGTGTTCAGGTTAATTCTGATGAACAGCAAAACTTTGGTGAAACT
TCTTCCAGCCAAAATTCTGAAACATTCCTTCTGGAATCCGAGGAGACCAGAAGTACGTCT
GTGATGGAGCTTCCTGTATCTTCAACCGTGGGAATTACATGGAACTCAGACATTGATCAG
TCTATTGCAGATGGGATCAATATCCATAATGGCCTGGATCCCGATCTTGATGATAGTGAA
CATGTGGCCGATGACCGACCTGAAGACCGAATGACGGAAGTTGAGATGTGGCAACAACTA
GAGCATGAGCTCTATGATCAGTCTGAAGGTGAAACTGATGTTGCCAAGGAGATTAGGGAA
GAAGAAGCAGCGATCGCAGAGTCAGGTCAGAGCTCAAGTGAAAGCATTCCAAACACAAAA
GAGGTGCACAGATTCTTTCCTCCTGGAAAGATAATGCATATAGTGACTCTCCTCTCTGAA
GAGGTCGATCATGTAAGTGACAGCGACATGTTGTGTGAGGATCATAACCAACCCAAGGAT
ACAAAGGTTGGAATATTTCTCACTCCTAGATCACTGTACAGTAAAATAAGGTTGTCACAA
ACTATGATCAGTGATCATCTCATGCCTGCTTATAGAAAGCAGATAGAGAAACTAATTAGG
GACCACGAGAATGATGATGCTCGCGTCAGATTAAATGAAACCTGA

Peptide Sequence

PEP ID

XP_016504558.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107822517 [Nicotiana tabacum]
Sequence

MATATIATAAGAAALLYYTLNKKLQSAPTTDDDDEECGSSGQDHAQLGTNRVSNRLIQAP
ATWLETIATLSETLRFTYSETLGKWPIGDLAFGISFLLKQQGNIHISSIFCGEDSTQLKG
SDIAAELKFLLHLLTVCWHFSKKPFPLFLEETGYSQESVLLQEPKAGILKPAFTILAGHR
SKSFFLVIRGTHSIKDTLTAVTGAVVPFHHTMVHEGGVSNLVLGYAHCGMVAAARWIAKL
ATPCLLKALSIYPEYKLKIVGHSLGGGTAALLTYILREQKELSAATCVAFAPAACMTWEL
AESGCEFITSVINGADLVPTFSAASVDDLRTEVTASAWLNDLRNQIEHTRILSTVYRSAS
ALGSRLPSIATARAKVAGAGAILRPVSSGTQVVMKRAQSMAQAALSRPAMQLSSWSCIGP
RRRPTSVQVNSDEQQNFGETSSSQNSETFLLESEETRSTSVMELPVSSTVGITWNSDIDQ
SIADGINIHNGLDPDLDDSEHVADDRPEDRMTEVEMWQQLEHELYDQSEGETDVAKEIRE
EEAAIAESGQSSSESIPNTKEVHRFFPPGKIMHIVTLLSEEVDHVSDSDMLCEDHNQPKD
TKVGIFLTPRSLYSKIRLSQTMISDHLMPAYRKQIEKLIRDHENDDARVRLNET

Transcript Sequence

Gene sequence data has not been registered.